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Query: SRR

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SRR 0 -0.616 0.010 -0.310

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SRR Ubiquitylation K223 -0.616 _VYAAEPSNADDCYQSKLK(gl)_

Background Information for SRR:


Pubmed-SRR »
Uniprot-SRR »
Biogrid-SRR »
ProteomicsDB-SRR »

Tumorportal-SRR »
COSMIC-SRR »
GenomeRNAi-SRR »
Genecards-SRR


Protein-protein Interactions for SRR
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait FCHO1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait OXNAD1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPACA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SRR
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members TrpB-like_PLP-dep IPR001926 0


Protein complexes (CORUM database) featuring SRR
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SRR
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0042493 response to drug Database 0.66
Category members GO Category GO:0051289 protein homotetramerization Database 0.44
Category members GO Category GO:0032496 response to lipopolysaccharide Database 0.35
Category members GO Category GO:0030165 PDZ domain binding Database 0.29
Category members GO Category GO:0005509 calcium ion binding Database 0.11
Category members Pathway Pathway_20 KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM 0 0
Category members GO Category GO:0000287 magnesium ion binding Database 0
Category members GO Category GO:0003941 L-serine ammonia-lyase activity Database 0
Category members GO Category GO:0006520 cellular amino acid metabolic process Database 0
Category members GO Category GO:0006563 L-serine metabolic process Database 0
Category members GO Category GO:0007420 brain development Database 0
Category members GO Category GO:0007568 aging Database 0
Category members GO Category GO:0014070 response to organic cyclic compound Database 0
Category members GO Category GO:0016594 glycine binding Database 0
Category members GO Category GO:0030170 pyridoxal phosphate binding Database 0
Category members GO Category GO:0042803 protein homodimerization activity Database 0
Category members GO Category GO:0042866 pyruvate biosynthetic process Database 0
Category members GO Category GO:0043025 neuronal cell body Database 0
Category members GO Category GO:0043278 response to morphine Database 0
Category members GO Category GO:0045177 apical part of cell Database 0
Category members GO Category GO:0070178 D-serine metabolic process Database 0


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