bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: SREK1IP1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SREK1IP1 0 -0.611 -0.030 0.150

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SREK1IP1 Phosphorylation T146 -0.464 -0.393 _HSST(ph)PNSSEFSR_
SREK1IP1 Phosphorylation S145 -0.368 _HSS(ph)TPNSSEFSR_

Background Information for SREK1IP1:





Protein-protein Interactions for SREK1IP1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait RAPGEF2 Cat. description Hein, Mann, Cell 2015
Category members IP bait SREK1IP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SREK1IP1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_CCHC IPR001878 1.51


Protein complexes (CORUM database) featuring SREK1IP1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SREK1IP1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0006397 mRNA processing Database 3.76
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0008270 zinc ion binding Database 0.29


© Copyright Svejstrup Laboratory 2015