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Query: SNAP47

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SNAP47 0 2.014 -1.610 2.400

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SNAP47 Ubiquitylation K176 -0.028 -0.359 _TRGEELTGLMAGSQK(gl)R_

Background Information for SNAP47:





Protein-protein Interactions for SNAP47

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait MAX Cat. description Hein, Mann, Cell 2015
Category members IP bait SEC22B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STX12 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STX18 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STX7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SNAP47

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members T_SNARE_dom IPR000727 0.54


Protein complexes (CORUM database) featuring SNAP47

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SNAP47

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members Pathway Pathway_1261 KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT 0 1.52
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0048471 perinuclear region of cytoplasm Database 0.39
Category members GO Category GO:0012505 endomembrane system Database 0
Category members GO Category GO:0031083 BLOC-1 complex Database 0


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