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Query: SMTN

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SMTN 0 0.749 -0.430 0.580

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SMTN Phosphorylation S792 0.169 _STS(ph)FGVPNANSIK_

Background Information for SMTN:





Protein-protein Interactions for SMTN

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDK4 Cat. description Hein, Mann, Cell 2015
Category members IP bait KIF7 Cat. description Hein, Mann, Cell 2015


Protein Domains in SMTN

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members CH-domain IPR001715 0.63
Category members CAMSAP_CH IPR022613 0.13


Protein complexes (CORUM database) featuring SMTN

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SMTN

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0003779 actin binding Database 5.41
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0015629 actin cytoskeleton Database 2.22
Category members GO Category GO:0005856 cytoskeleton Database 0.63
Category members GO Category GO:0006939 smooth muscle contraction Database 0
Category members GO Category GO:0007517 muscle organ development Database 0
Category members GO Category GO:0008307 structural constituent of muscle Database 0


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