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Query: SLIRP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SLIRP 0 1.483 0.930 -0.920 -0.107 -0.626 -0.016 0.062
SLIRP 0 1.483 0.930 -0.920 0.699

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SLIRP Phosphorylation S102 0.714 0.757 _LPQTS(ph)DDEKKDF_

Background Information for SLIRP:


Pubmed-SLIRP »
Uniprot-SLIRP »
Biogrid-SLIRP »
ProteomicsDB-SLIRP »

Tumorportal-SLIRP »
COSMIC-SLIRP »
GenomeRNAi-SLIRP »
Genecards-SLIRP


Protein-protein Interactions for SLIRP
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATP7A Cat. description Hein, Mann, Cell 2015
Category members IP bait CDH1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CENPE Cat. description Hein, Mann, Cell 2015
Category members IP bait KCTD5 Cat. description Hein, Mann, Cell 2015
Category members IP bait LRPPRC Cat. description Hein, Mann, Cell 2015


Protein Domains in SLIRP
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RRM_dom IPR000504 4.34


Protein complexes (CORUM database) featuring SLIRP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SLIRP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0030529 ribonucleoprotein complex Database 8.45
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0000961 negative regulation of mitochondrial RNA catabolic process Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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