bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: SLC4A2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SLC4A2 0 -2.069 1.380 -0.990 -0.916 -1.029

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SLC4A2 Phosphorylation S147 0.385 0.390 _ALTQPS(ph)PVSTPSSVQFFLQEDDSADRK_
SLC4A2 Phosphorylation S116 0.111 -0.085 _RRPGAS(ph)PTGETPTIEEGEEDEDEASEAEGAR_
SLC4A2 Ubiquitylation K896 -0.347 _SLAGQSGQGK(gl)PR_
SLC4A2 Ubiquitylation K656 -0.552 -0.546 _LLPTGAGLEPK(gl)SAQDK_
SLC4A2 Ubiquitylation K978 -0.659 _LSVPSGFSVTAPEK(gl)R_
SLC4A2 Phosphorylation S135 -0.948 _RRPGASPTGETPTIEEGEEDEDEAS(ph)EAEGAR_
SLC4A2 Ubiquitylation K1076 -1.196 _SVTHANALTVM(ox)SK(gl)AVAPGDKPK_

Background Information for SLC4A2:


Pubmed-SLC4A2 »
Uniprot-SLC4A2 »
Biogrid-SLC4A2 »
ProteomicsDB-SLC4A2 »

Tumorportal-SLC4A2 »
COSMIC-SLC4A2 »
GenomeRNAi-SLC4A2 »
Genecards-SLC4A2


Protein-protein Interactions for SLC4A2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATL3 Cat. description Hein, Mann, Cell 2015
Category members IP bait CYR61 Cat. description Hein, Mann, Cell 2015
Category members IP bait ELL2 Cat. description Hein, Mann, Cell 2015
Category members IP bait IQGAP3 Cat. description Hein, Mann, Cell 2015
Category members IP bait KIF2C Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH10 Cat. description Hein, Mann, Cell 2015
Category members IP bait PHOSPHO1 Cat. description Hein, Mann, Cell 2015
Category members IP bait THOC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS4B Cat. description Hein, Mann, Cell 2015
Category members IP bait APLNR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ATP2B2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C1orf64 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM134C Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPR21 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KDELR3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGALS3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGALS8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGALS9C Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PTGIR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PTH1R Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC39A8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC4A8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPDEF Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait XPR1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SLC4A2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Alpha/beta_knot_MTases IPR029028 0.4
Category members Anion_exchange IPR001717 0.18
Category members HCO3_transpt_euk IPR003020 0.06
Category members HCO3_transpt_C IPR011531 0.06
Category members Band3_cytoplasmic_dom IPR013769 0.06
Category members PTrfase/Anion_transptr IPR016152 0.06


Protein complexes (CORUM database) featuring SLC4A2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SLC4A2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0016020 membrane Database 0.52
Category members Pathway Pathway_96 REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT 0 0.23
Category members GO Category GO:0006811 ion transport Database 0.18
Category members GO Category GO:0055085 transmembrane transport Database 0.12
Category members Pathway Pathway_99 REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES 0 0.08
Category members GO Category GO:0005452 inorganic anion exchanger activity Database 0.05
Category members GO Category GO:0016323 basolateral plasma membrane Database 0.04
Category members Pathway Pathway_1207 REACTOME_TRANSPORT_OF_INORGANIC_CATIONS_ANIONS_AND_AMINO_ACIDS_OLIGOPEPTIDES 0 0
Category members GO Category GO:0005215 transporter activity Database 0
Category members GO Category GO:0006810 transport Database 0
Category members GO Category GO:0006820 anion transport Database 0
Category members GO Category GO:0006821 chloride transport Database 0
Category members GO Category GO:0008509 anion transmembrane transporter activity Database 0
Category members GO Category GO:0015108 chloride transmembrane transporter activity Database 0
Category members GO Category GO:0015701 bicarbonate transport Database 0


.

© Copyright Svejstrup Laboratory 2015