bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: SLC39A7

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SLC39A7 0 -2.469 -1.040 1.740 -1.159

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SLC39A7 Ubiquitylation K310 -2.561 -0.489 _DGPVRPQNAEEEK(gl)R_

Background Information for SLC39A7:


Pubmed-SLC39A7 »
Uniprot-SLC39A7 »
Biogrid-SLC39A7 »
ProteomicsDB-SLC39A7 »

Tumorportal-SLC39A7 »
COSMIC-SLC39A7 »
GenomeRNAi-SLC39A7 »
Genecards-SLC39A7


Protein-protein Interactions for SLC39A7
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATP7A Cat. description Hein, Mann, Cell 2015
Category members IP bait CUL4A Cat. description Hein, Mann, Cell 2015
Category members IP bait EEF1A1;EEF1A1P5 Cat. description Hein, Mann, Cell 2015
Category members IP bait KCNK1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MAD2L1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MBOAT1 Cat. description Hein, Mann, Cell 2015
Category members IP bait TMED2 Cat. description Hein, Mann, Cell 2015


Protein Domains in SLC39A7
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Kininogen IPR002395 0
Category members ZIP IPR003689 0


Protein complexes (CORUM database) featuring SLC39A7
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SLC39A7
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005789 endoplasmic reticulum membrane Database 1.57
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members Pathway Pathway_96 REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT 0 0.23
Category members GO Category GO:0055085 transmembrane transport Database 0.12
Category members Pathway Pathway_99 REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES 0 0.08
Category members Pathway Pathway_1319 REACTOME_ZINC_TRANSPORTERS 0 0
Category members Pathway Pathway_750 REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS 0 0
Category members Pathway Pathway_751 REACTOME_METAL_ION_SLC_TRANSPORTERS 0 0
Category members GO Category GO:0006829 zinc ion transport Database 0
Category members GO Category GO:0030001 metal ion transport Database 0
Category members GO Category GO:0046873 metal ion transmembrane transporter activity Database 0


.

© Copyright Svejstrup Laboratory 2015