bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: SLC38A2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SLC38A2 1 2.964 -1.700 2.660
SLC38A2 1 2.964 -1.700 2.660 -0.122 0.385

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SLC38A2 Ubiquitylation K2 -0.630 0.376 _(ac)MK(gl)K(gl)AEMGR_
SLC38A2 Ubiquitylation K3 -0.630 0.376 _(ac)MK(gl)K(gl)AEMGR_
SLC38A2 Ubiquitylation K59 -0.632 -0.460 _SHYADVDPENQNFLLESNLGK(gl)K_
SLC38A2 Ubiquitylation K60 -0.643 -0.681 _SHYADVDPENQNFLLESNLGKK(gl)_
SLC38A2 Ubiquitylation K33 -1.369 -1.069 _FSISPDEDSSSYSSNSDFNYSYPTK(gl)QAALK_
SLC38A2 Ubiquitylation K38 -0.334 _QAALK(gl)SHYADVDPENQNFLLESNLGK_

Background Information for SLC38A2:


Pubmed-SLC38A2 »
Uniprot-SLC38A2 »
Biogrid-SLC38A2 »
ProteomicsDB-SLC38A2 »

Tumorportal-SLC38A2 »
COSMIC-SLC38A2 »
GenomeRNAi-SLC38A2 »
Genecards-SLC38A2


Protein-protein Interactions for SLC38A2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATP6AP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait BMPR1A Cat. description Hein, Mann, Cell 2015
Category members IP bait CDC42 Cat. description Hein, Mann, Cell 2015
Category members IP bait CHMP4B Cat. description Hein, Mann, Cell 2015
Category members IP bait GJB2 Cat. description Hein, Mann, Cell 2015
Category members IP bait GOLT1B Cat. description Hein, Mann, Cell 2015
Category members IP bait KIF20B Cat. description Hein, Mann, Cell 2015
Category members IP bait RAB5C Cat. description Hein, Mann, Cell 2015
Category members IP bait TGS1 Cat. description Hein, Mann, Cell 2015
Category members IP bait TMED2 Cat. description Hein, Mann, Cell 2015
Category members IP bait TMEM63B Cat. description Hein, Mann, Cell 2015
Category members IP bait TUBA3C;TUBA3E Cat. description Hein, Mann, Cell 2015
Category members IP bait DLK1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LPAR6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSPAN5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SLC38A2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members AA_transpt_TM IPR013057 0


Protein complexes (CORUM database) featuring SLC38A2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SLC38A2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members Pathway Pathway_1307 REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE 0 0.32
Category members Pathway Pathway_96 REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT 0 0.23
Category members GO Category GO:0007268 synaptic transmission Database 0.23
Category members GO Category GO:0006811 ion transport Database 0.18
Category members GO Category GO:0055085 transmembrane transport Database 0.12
Category members Pathway Pathway_1271 REACTOME_AMINO_ACID_AND_OLIGOPEPTIDE_SLC_TRANSPORTERS 0 0.11
Category members GO Category GO:0006814 sodium ion transport Database 0.09
Category members Pathway Pathway_99 REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES 0 0.08
Category members Pathway Pathway_397 REACTOME_GLUTAMATE_NEUROTRANSMITTER_RELEASE_CYCLE 0 0.01
Category members Pathway Pathway_1207 REACTOME_TRANSPORT_OF_INORGANIC_CATIONS_ANIONS_AND_AMINO_ACIDS_OLIGOPEPTIDES 0 0
Category members Pathway Pathway_139 REACTOME_NEURONAL_SYSTEM 0 0
Category members Pathway Pathway_140 REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES 0 0
Category members Pathway Pathway_390 REACTOME_NEUROTRANSMITTER_RELEASE_CYCLE 0 0
Category members GO Category GO:0003333 amino acid transmembrane transport Database 0
Category members GO Category GO:0006865 amino acid transport Database 0
Category members GO Category GO:0007269 neurotransmitter secretion Database 0
Category members GO Category GO:0014047 glutamate secretion Database 0
Category members GO Category GO:0015171 amino acid transmembrane transporter activity Database 0
Category members GO Category GO:0015293 symporter activity Database 0


.

© Copyright Svejstrup Laboratory 2015