bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: SLC35A2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SLC35A2 0 -1.481 0.600 -0.120

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SLC35A2 Ubiquitylation K416 -1.032 -0.450 _GDLITEPFLPK(gl)SVLVK_

Background Information for SLC35A2:


Pubmed-SLC35A2 »
Uniprot-SLC35A2 »
Biogrid-SLC35A2 »
ProteomicsDB-SLC35A2 »

Tumorportal-SLC35A2 »
COSMIC-SLC35A2 »
GenomeRNAi-SLC35A2 »
Genecards-SLC35A2


Protein-protein Interactions for SLC35A2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait SLC35A2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SLC35A2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members DMT IPR000620 0.05
Category members UDPgal_transpt IPR004689 0
Category members Tpt_PEP_trans_dom IPR004853 0
Category members Nuc_sug_transpt IPR007271 0
Category members UAA IPR013657 0
Category members UDP/CMP-sugar_transptr IPR021189 0


Protein complexes (CORUM database) featuring SLC35A2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SLC35A2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members Pathway Pathway_96 REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT 0 0.23
Category members GO Category GO:0055085 transmembrane transport Database 0.12
Category members Pathway Pathway_99 REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES 0 0.08
Category members GO Category GO:0005459 UDP-galactose transmembrane transporter activity Database 0.04
Category members Pathway Pathway_743 REACTOME_TRANSPORT_OF_VITAMINS_NUCLEOSIDES_AND_RELATED_MOLECULES 0 0
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0005338 nucleotide-sugar transmembrane transporter activity Database 0
Category members GO Category GO:0005351 sugar:hydrogen symporter activity Database 0
Category members GO Category GO:0006012 galactose metabolic process Database 0
Category members GO Category GO:0006810 transport Database 0
Category members GO Category GO:0008643 carbohydrate transport Database 0
Category members GO Category GO:0015780 nucleotide-sugar transport Database 0


.

© Copyright Svejstrup Laboratory 2015