bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: SLC19A1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SLC19A1 0 2.457 1.010 -0.520 -0.359

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SLC19A1 Ubiquitylation K501 1.068 0.658 _SAAEEK(gl)AAQALSVQDK_
SLC19A1 Phosphorylation S245 0.332 _GRCETS(ph)ASELER_
SLC19A1 Phosphorylation S247 0.202 0.283 _GRCETSAS(ph)ELER_
SLC19A1 Phosphorylation S27 0.757 0.272 _(ac)MVPSS(ph)PAVEK_
SLC19A1 Ubiquitylation K259 -0.427 -0.205 _MNPGPGGK(gl)LGHALR_

Background Information for SLC19A1:





Protein-protein Interactions for SLC19A1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CD164L2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SLC19A1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Folate_carrier IPR002666 0
Category members MFS_dom_general_subst_transpt IPR016196 0


Protein complexes (CORUM database) featuring SLC19A1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SLC19A1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005887 integral to plasma membrane Database 1.69
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0006767 water-soluble vitamin metabolic process Database 0.27
Category members GO Category GO:0006766 vitamin metabolic process Database 0.23
Category members Pathway Pathway_279 REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS 0 0.18
Category members GO Category GO:0005542 folic acid binding Database 0
Category members GO Category GO:0006810 transport Database 0
Category members GO Category GO:0008152 metabolic process Database 0
Category members GO Category GO:0008517 folic acid transporter activity Database 0
Category members GO Category GO:0015884 folic acid transport Database 0
Category members GO Category GO:0016491 oxidoreductase activity Database 0
Category members GO Category GO:0046655 folic acid metabolic process Database 0
Category members GO Category GO:0055114 oxidation-reduction process Database 0


© Copyright Svejstrup Laboratory 2015