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Query: SFSWAP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SFSWAP 0 1.739 -0.350 0.760 -0.474 -0.539 0.108

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SFSWAP Phosphorylation S961 0.692 0.601 _GVS(ph)QEKEAQISSAIVSSVQSK_
SFSWAP Phosphorylation S283 0.289 -0.067 _SGVSS(ph)DNEDDDDEEDGNYLHPSLFASK_
SFSWAP Phosphorylation S282 -0.047 -0.166 _SGVS(ph)SDNEDDDDEEDGNYLHPSLFASK_
SFSWAP Phosphorylation S279 0.075 _S(ph)GVSSDNEDDDDEEDGNYLHPSLFASK_
SFSWAP Ubiquitylation K473 0.591 _NGLK(gl)FETSVR_

Background Information for SFSWAP:


Pubmed-SFSWAP »
Uniprot-SFSWAP »
Biogrid-SFSWAP »
ProteomicsDB-SFSWAP »

Tumorportal-SFSWAP »
COSMIC-SFSWAP »
GenomeRNAi-SFSWAP »
Genecards-SFSWAP


Protein-protein Interactions for SFSWAP
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDKN2AIP Cat. description Hein, Mann, Cell 2015
Category members IP bait NEIL3 Cat. description Hein, Mann, Cell 2015
Category members IP bait NFYA Cat. description Hein, Mann, Cell 2015
Category members IP bait C16orf80 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CAPN13 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EAF1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait JMJD6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RBM17 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSEN2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SFSWAP
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Surp IPR000061 0
Category members SWAP_N_domain IPR019147 0


Protein complexes (CORUM database) featuring SFSWAP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SFSWAP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0006397 mRNA processing Database 3.76
Category members GO Category GO:0048025 negative regulation of mRNA splicing, via spliceosome Database 2.79
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0006376 mRNA splice site selection Database 0.63
Category members GO Category GO:0006396 RNA processing Database 0.17
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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