bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: SERPINB12

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SERPINB12 0 -7.641 -0.010 -0.180 -3.403 -4.238

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for SERPINB12:


Pubmed-SERPINB12 »
Uniprot-SERPINB12 »
Biogrid-SERPINB12 »
ProteomicsDB-SERPINB12 »

Tumorportal-SERPINB12 »
COSMIC-SERPINB12 »
GenomeRNAi-SERPINB12 »
Genecards-SERPINB12


Protein-protein Interactions for SERPINB12
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BAX Cat. description Hein, Mann, Cell 2015
Category members IP bait CDC23 Cat. description Hein, Mann, Cell 2015
Category members IP bait KPNB1 Cat. description Hein, Mann, Cell 2015
Category members IP bait LLGL1 Cat. description Hein, Mann, Cell 2015
Category members IP bait THOC5 Cat. description Hein, Mann, Cell 2015


Protein Domains in SERPINB12
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Serpin_dom IPR023796 0.21


Protein complexes (CORUM database) featuring SERPINB12
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SERPINB12
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members DDR Literature pubmedid:24332808 Marechal et al., 2014 RPA-mediated recruitment INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005615 extracellular space Database 4.72
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0019899 enzyme binding Database 1.57
Category members GO Category GO:0004867 serine-type endopeptidase inhibitor activity Database 1.42
Category members GO Category GO:0010951 negative regulation of endopeptidase activity Database 0
Category members GO Category GO:0030162 regulation of proteolysis Database 0
Category members GO Category GO:0042177 negative regulation of protein catabolic process Database 0


.

© Copyright Svejstrup Laboratory 2015