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Query: SERBP1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SERBP1 2 4.632 -1.060 1.370 -0.296 -0.591 -0.103
SERBP1 2 4.632 0.710 -0.510 -0.296 -0.591 -0.103

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SERBP1 Ubiquitylation K102 -0.670 1.642 _EETQPPVALK(gl)K_
SERBP1 Ubiquitylation K103 0.515 1.642 _EETQPPVALKK(gl)_
SERBP1 Ubiquitylation K68 0.778 0.801 _SAAQAAAQTNSNAAGK(gl)QLR_
SERBP1 Phosphorylation S330 0.681 _SKS(ph)EEAHAEDSVM(ox)DHHFR_
SERBP1 Phosphorylation S25 0.255 0.468 _FDQLFDDES(ph)DPFEVLK_
SERBP1 Phosphorylation S202 -0.018 0.293 _S(ph)SFSHYSGLK_
SERBP1 Phosphorylation S203 -0.193 0.152 _SS(ph)FSHYSGLK_
SERBP1 Phosphorylation S392 0.044 _TDKSS(ph)ASAPDVDDPEAFPALA_
SERBP1 Ubiquitylation K52 0.230 -0.222 _EAGGGGVGGPGAK(gl)SAAQAAAQTNSNAAGK_
SERBP1 Phosphorylation S234 -1.136 -0.256 _DELTES(ph)PK_
SERBP1 Ubiquitylation K72 0.682 _SAAQAAAQTNSNAAGK(gl)QLRK_
SERBP1 Ubiquitylation K320 0.572 _KPNEGADGQWK(gl)K_
SERBP1 Ubiquitylation K327 1.674 _GFVLHK(gl)SK_
SERBP1 Ubiquitylation K329 1.390 _GFVLHKSK(gl)_
SERBP1 Phosphorylation T388 0.034 _T(ph)DKSSASAPDVDDPEAFPALA_

Background Information for SERBP1:


Pubmed-SERBP1 »
Uniprot-SERBP1 »
Biogrid-SERBP1 »
ProteomicsDB-SERBP1 »

Tumorportal-SERBP1 »
COSMIC-SERBP1 »
GenomeRNAi-SERBP1 »
Genecards-SERBP1


Protein-protein Interactions for SERBP1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BCAS2 Cat. description Hein, Mann, Cell 2015
Category members IP bait EIF3A Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPU Cat. description Hein, Mann, Cell 2015
Category members IP bait NPM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL10 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL35 Cat. description Hein, Mann, Cell 2015
Category members IP bait RRBP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SERBP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SERBP1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members HABP4_PAIRBP1-bd IPR006861 0.12


Protein complexes (CORUM database) featuring SERBP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SERBP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0042981 regulation of apoptotic process Database 0.79
Category members GO Category GO:0048471 perinuclear region of cytoplasm Database 0.39
Category members GO Category GO:0003730 mRNA 3'-UTR binding Database 0.24
Category members GO Category GO:0043488 regulation of mRNA stability Database 0.07


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