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Query: SEC22B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SEC22B 0 5.626 0.551 0.764 0.474

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SEC22B Phosphorylation S137 0.822 1.496 _NLGS(ph)INTELQDVQR_
SEC22B Phosphorylation S177 0.615 1.070 _ANNLSSLS(ph)KK_
SEC22B Ubiquitylation K169 -0.410 0.213 _GEALSALDSK(gl)ANNLSSLSK_
SEC22B Ubiquitylation K179 -0.296 0.146 _ANNLSSLSKK(gl)_
SEC22B Ubiquitylation K178 -0.442 0.077 _ANNLSSLSK(gl)K_
SEC22B Ubiquitylation K38 1.305 -0.022 _DLQQYQSQAK(gl)QLFR_
SEC22B Ubiquitylation K43 -0.119 _K(gl)LNEQSPTR_

Background Information for SEC22B:


Pubmed-SEC22B »
Uniprot-SEC22B »
Biogrid-SEC22B »
ProteomicsDB-SEC22B »

Tumorportal-SEC22B »
COSMIC-SEC22B »
GenomeRNAi-SEC22B »
Genecards-SEC22B


Protein-protein Interactions for SEC22B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATL3 Cat. description Hein, Mann, Cell 2015
Category members IP bait ATP2A2 Cat. description Hein, Mann, Cell 2015
Category members IP bait ATP6AP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait ATP7A Cat. description Hein, Mann, Cell 2015
Category members IP bait CENPO Cat. description Hein, Mann, Cell 2015
Category members IP bait GOLT1B Cat. description Hein, Mann, Cell 2015
Category members IP bait KCNK1 Cat. description Hein, Mann, Cell 2015
Category members IP bait KCTD5 Cat. description Hein, Mann, Cell 2015
Category members IP bait RAB5C Cat. description Hein, Mann, Cell 2015
Category members IP bait SMN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SNAP29 Cat. description Hein, Mann, Cell 2015
Category members IP bait TUBA3C;TUBA3E Cat. description Hein, Mann, Cell 2015
Category members IP bait TUBE1 Cat. description Hein, Mann, Cell 2015
Category members IP bait USO1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RINT1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SEC22B Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SEC22B
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring SEC22B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SEC22B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Pathway Pathway_1261 KEGG_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT 0 1.52


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