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Query: SCARF2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SCARF2 0 -3.170 1.760 -0.630

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SCARF2 Phosphorylation S687 -1.576 -1.749 _APS(ph)PPPPGSEAAPSPSK_
SCARF2 Phosphorylation S742 -2.992 -2.190 _TRDPTPRPPGLPEEATALAAPS(ph)PPR_
SCARF2 Phosphorylation S698 -2.102 -2.290 _APS(ph)PPPPGSEAAPS(ph)PSK_
SCARF2 Ubiquitylation K503 0.155 _ISMK(gl)LPR_

Background Information for SCARF2:


Pubmed-SCARF2 »
Uniprot-SCARF2 »
Biogrid-SCARF2 »
ProteomicsDB-SCARF2 »

Tumorportal-SCARF2 »
COSMIC-SCARF2 »
GenomeRNAi-SCARF2 »
Genecards-SCARF2


Protein-protein Interactions for SCARF2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait KLHL22 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SFTPC Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC39A5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPINT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SCARF2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members EG-like_dom IPR000742 1.74
Category members EGF_laminin IPR002049 0.04
Category members Growth_fac_rcpt_N_dom IPR009030 0


Protein complexes (CORUM database) featuring SCARF2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SCARF2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0007157 heterophilic cell-cell adhesion Database 0.04
Category members GO Category GO:0005044 scavenger receptor activity Database 0


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