bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: SCAMP4

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SCAMP4 0 0.006 0.530 -1.030

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SCAMP4 Ubiquitylation K195 -0.189 0.195 _GAGGSFQK(gl)AQTEWNTGTWR_
SCAMP4 Ubiquitylation K14 -1.961 -0.862 _(ac)SEK(gl)ENNFPPLPK_

Background Information for SCAMP4:


Pubmed-SCAMP4 »
Uniprot-SCAMP4 »
Biogrid-SCAMP4 »
ProteomicsDB-SCAMP4 »

Tumorportal-SCAMP4 »
COSMIC-SCAMP4 »
GenomeRNAi-SCAMP4 »
Genecards-SCAMP4


Protein-protein Interactions for SCAMP4
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait REEP5 Cat. description Hein, Mann, Cell 2015
Category members IP bait GDPD5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait REEP5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SCAMP4
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members SCAMP IPR007273 0


Protein complexes (CORUM database) featuring SCAMP4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SCAMP4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0015031 protein transport Database 3.48


.

© Copyright Svejstrup Laboratory 2015