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Query: SCAF1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SCAF1 0 3.240 0.360 -0.870 1.462 0.866 0.618 0.602

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SCAF1 Phosphorylation S965 0.993 1.027 _GAEETSWS(ph)GEER_
SCAF1 Phosphorylation S734 0.683 0.629 _EVLYDS(ph)EGLS(ph)GEER_
SCAF1 Phosphorylation S738 0.683 0.629 _EVLYDS(ph)EGLS(ph)GEER_
SCAF1 Ubiquitylation K55 -3.632 0.168 _AIQQAVGSSLQGDLPNDK(gl)DGSR_
SCAF1 Phosphorylation S872 0.313 -0.001 _ES(ph)RSPFLKPDER_
SCAF1 Phosphorylation S874 -0.005 -0.127 _S(ph)PFLKPDER_
SCAF1 Phosphorylation S724 -0.791 -0.240 _GPSPAPAS(ph)SPKR_
SCAF1 Phosphorylation S725 -0.791 -0.240 _GPSPAPAS(ph)SPKR_
SCAF1 Ubiquitylation K158 -2.496 -0.562 _TGK(gl)TVSPQSNSSRPTCAR_
SCAF1 Phosphorylation T989 -1.481 -1.295 _AAPPPPALT(ph)PDSQTVDSSCK_
SCAF1 Phosphorylation T1001 -1.564 _AAPPPPALT(ph)PDSQTVDSSCKT(ph)PEVSFLPEEATEEAGVR_
SCAF1 Phosphorylation S239 -1.543 -1.608 _FDIYDPFHPTDEAYS(ph)PPPAPEQK_
SCAF1 Phosphorylation S548 -1.453 -1.715 _EAASSSSGTQPAPPAPAS(ph)PWDSK_
SCAF1 Phosphorylation S552 -1.618 -2.139 _EAASSSSGTQPAPPAPASPWDS(ph)KK_
SCAF1 Phosphorylation S453 -0.552 _APEGDDFLSLHAES(ph)DGEGALQVDLGEPAPAPPAADSR_

Background Information for SCAF1:





Protein-protein Interactions for SCAF1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CEP170P1 Cat. description Hein, Mann, Cell 2015
Category members IP bait NPM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL10 Cat. description Hein, Mann, Cell 2015
Category members IP bait THOC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait THOC7 Cat. description Hein, Mann, Cell 2015
Category members IP bait C11orf57 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HIST1H1T Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait JMJD6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MKI67IP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PNN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait POLR2G Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RBM4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RPL14 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RRP8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRNP70 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait U2AF2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZBTB48 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SCAF1

Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring SCAF1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SCAF1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0006397 mRNA processing Database 3.76
Category members GO Category GO:0019904 protein domain specific binding Database 1.85
Category members GO Category GO:0006366 transcription from RNA polymerase II promoter Database 0.96


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