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Query: SAMD4B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SAMD4B 1 6.674 -3.220 6.030 -0.078

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SAMD4B Phosphorylation S555 0.407 _GWAFGS(ph)NSLPIAGSVGMGVAR_
SAMD4B Phosphorylation S557 0.147 0.122 _GWAFGSNS(ph)LPIAGSVGMGVAR_
SAMD4B Phosphorylation S252 -0.537 0.118 _SMS(ph)LIPTSPQVPGEWPS(ph)PEELGAR_
SAMD4B Phosphorylation S271 -0.057 0.019 _AAFTTPDHAPLS(ph)PQSSVASSGSEQTEEQGSSR_
SAMD4B Phosphorylation S607 -0.485 _HALTS(ph)PSLGGQGR_
SAMD4B Phosphorylation S592 0.021 -0.897 _MGLLS(ph)PSGIGGVSPR_
SAMD4B Phosphorylation S600 -0.897 _MGLLS(ph)PSGIGGVS(ph)PR_
SAMD4B Phosphorylation S172 -1.163 _QGS(ph)DEWGGPAELGPGEAGPGWQDKPPR_
SAMD4B Phosphorylation S238 -1.165 -1.292 _SMS(ph)LIPTSPQVPGEWPSPEELGAR_
SAMD4B Phosphorylation S236 -1.760 _S(ph)MSLIPTSPQVPGEWPSPEELGAR_
SAMD4B Phosphorylation T606 0.315 _HALT(ph)SPSLGGQGR_

Background Information for SAMD4B:


Pubmed-SAMD4B »
Uniprot-SAMD4B »
Biogrid-SAMD4B »
ProteomicsDB-SAMD4B »

Tumorportal-SAMD4B »
COSMIC-SAMD4B »
GenomeRNAi-SAMD4B »
Genecards-SAMD4B


Protein-protein Interactions for SAMD4B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait NFYC Cat. description Hein, Mann, Cell 2015
Category members IP bait RGMA Cat. description Hein, Mann, Cell 2015
Category members IP bait SAMD4B Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SAMD4B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members SAM IPR001660 0
Category members SAM_2 IPR011510 0
Category members SAM/pointed IPR013761 0
Category members SAM_type1 IPR021129 0


Protein complexes (CORUM database) featuring SAMD4B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SAMD4B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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