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Query: RTN3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RTN3 0 2.630 -1.240 1.350 1.138 0.864

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RTN3 Ubiquitylation K1013 -0.400 0.688 _DQTK(gl)SIVEK_
RTN3 Ubiquitylation K1018 -0.341 0.364 _SIVEK(gl)IQAK_
RTN3 Ubiquitylation K1022 -0.027 _IQAK(gl)LPGIAK_
RTN3 Phosphorylation S30 -1.371 -1.087 _(ac)AEPSAATQSHSISSSSFGAEPSAPGGGGS(ph)PGACPALGTK_
RTN3 Phosphorylation S23 -1.069 _(ac)AEPSAATQSHSISSSSFGAEPS(ph)APGGGGSPGACPALGTK_

Background Information for RTN3:


Pubmed-RTN3 »
Uniprot-RTN3 »
Biogrid-RTN3 »
ProteomicsDB-RTN3 »

Tumorportal-RTN3 »
COSMIC-RTN3 »
GenomeRNAi-RTN3 »
Genecards-RTN3


Protein-protein Interactions for RTN3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATL3 Cat. description Hein, Mann, Cell 2015
Category members IP bait RTN4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RTN3
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Reticulon IPR003388 0.15


Protein complexes (CORUM database) featuring RTN3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RTN3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0019048 modulation by virus of host morphology or physiology Database 7.81
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005615 extracellular space Database 4.72
Category members GO Category GO:0006915 apoptotic process Database 2.12
Category members GO Category GO:0005789 endoplasmic reticulum membrane Database 1.57
Category members GO Category GO:0016192 vesicle-mediated transport Database 1.1
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0006950 response to stress Database 0


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