bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: RPUSD2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RPUSD2 0 -1.534 0.320 -0.760

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RPUSD2 Phosphorylation S68 -0.812 -0.722 _VELS(ph)PGPPKPAGR_

Background Information for RPUSD2:





Protein-protein Interactions for RPUSD2

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ALDH8A1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CELA2B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPR156 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NEU4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PFDN4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PMPCA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPATA8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RPUSD2

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members PsdUridine_synth_RsuA/RluD IPR006145 0.04
Category members PsdUridine_synth_cat_dom IPR020103 0


Protein complexes (CORUM database) featuring RPUSD2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RPUSD2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0003674 molecular_function Database 0.08
Category members GO Category GO:0001522 pseudouridine synthesis Database 0
Category members GO Category GO:0005575 cellular_component Database 0
Category members GO Category GO:0008150 biological_process Database 0
Category members GO Category GO:0009451 RNA modification Database 0
Category members GO Category GO:0009982 pseudouridine synthase activity Database 0


© Copyright Svejstrup Laboratory 2015