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Query: RPIA

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RPIA 1 3.315 -1.390 1.260

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RPIA Ubiquitylation K77 -1.470 _GGAGNTSTSCGDSNSICPAPSTMSK(gl)AEEAKK_
RPIA Ubiquitylation K203 2.055 _DSK(gl)NLGDQWHK_

Background Information for RPIA:


Pubmed-RPIA »
Uniprot-RPIA »
Biogrid-RPIA »
ProteomicsDB-RPIA »

Tumorportal-RPIA »
COSMIC-RPIA »
GenomeRNAi-RPIA »
Genecards-RPIA


Protein-protein Interactions for RPIA
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait AURKA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DHH Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ERP44 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MARK4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCMT1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ST8SIA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRPV5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait WDR5B Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RPIA
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring RPIA
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RPIA
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005829 cytosol Database INF
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0043231 intracellular membrane-bounded organelle Database 0.43
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0019693 ribose phosphate metabolic process Database 0.33
Category members GO Category GO:0005622 intracellular Database 0.32
Category members Pathway Pathway_34 REACTOME_METABOLISM_OF_CARBOHYDRATES 0 0.31
Category members Pathway Pathway_51 KEGG_PENTOSE_PHOSPHATE_PATHWAY 0 0.11
Category members GO Category GO:0006098 pentose-phosphate shunt Database 0.07
Category members GO Category GO:0005975 carbohydrate metabolic process Database 0.07
Category members GO Category GO:0009052 pentose-phosphate shunt, non-oxidative branch Database 0
Category members GO Category GO:0030246 carbohydrate binding Database 0
Category members GO Category GO:0048029 monosaccharide binding Database 0


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