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Query: RPE

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RPE 0 -0.198 -0.510 0.510

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RPE Ubiquitylation K223 -0.708 _NVCSEAAQK(gl)R_

Background Information for RPE:


Pubmed-RPE »
Uniprot-RPE »
Biogrid-RPE »
ProteomicsDB-RPE »

Tumorportal-RPE »
COSMIC-RPE »
GenomeRNAi-RPE »
Genecards-RPE


Protein-protein Interactions for RPE
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait RPE Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RPE
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RibuloseP-bd_barrel IPR011060 0.08


Protein complexes (CORUM database) featuring RPE
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RPE
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0043231 intracellular membrane-bounded organelle Database 0.43
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members Pathway Pathway_34 REACTOME_METABOLISM_OF_CARBOHYDRATES 0 0.31
Category members GO Category GO:0042802 identical protein binding Database 0.26
Category members Pathway Pathway_51 KEGG_PENTOSE_PHOSPHATE_PATHWAY 0 0.11
Category members GO Category GO:0003824 catalytic activity Database 0.11
Category members GO Category GO:0006098 pentose-phosphate shunt Database 0.07
Category members GO Category GO:0005975 carbohydrate metabolic process Database 0.07
Category members GO Category GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives Database 0.04
Category members Pathway Pathway_62 KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS 0 0
Category members GO Category GO:0008152 metabolic process Database 0
Category members GO Category GO:0009052 pentose-phosphate shunt, non-oxidative branch Database 0
Category members GO Category GO:0042803 protein homodimerization activity Database 0
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0048029 monosaccharide binding Database 0


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