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Query: RPAP1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RPAP1 0 0.419 -1.220 1.950 0.145

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RPAP1 Phosphorylation S80 -1.340 -0.336 _ARPS(ph)PGHCLPEDEDPEER_
RPAP1 Phosphorylation S72 -2.022 -1.787 _DVVMLDNLPDLPPALVPS(ph)PPK_

Background Information for RPAP1:


Pubmed-RPAP1 »
Uniprot-RPAP1 »
Biogrid-RPAP1 »
ProteomicsDB-RPAP1 »

Tumorportal-RPAP1 »
COSMIC-RPAP1 »
GenomeRNAi-RPAP1 »
Genecards-RPAP1


Protein-protein Interactions for RPAP1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait POLK Cat. description Hein, Mann, Cell 2015
Category members IP bait C1orf94 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPN2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GRINL1A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait POLR1C Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RPAP1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members ARM-type_fold IPR016024 9.26


Protein complexes (CORUM database) featuring RPAP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 2685 RNA polymerase II (RNAPII) Database 0.12
Category members Corum 2812 RPAP1-RPB2-RPB3 complex Database 0


Categories featuring RPAP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005488 binding Database 9.32
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0003899 DNA-directed RNA polymerase activity Database 0.46


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