bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: RNF113A

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RNF113A 0 2.439 -1.510 1.980

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RNF113A Phosphorylation S6 -0.126 0.383 _(ac)AEQLS(ph)PGKAVDQVCTFLFK_
RNF113A Phosphorylation S253 0.076 -0.021 _YGVYEDENYEVGS(ph)DDEEIPFK_

Background Information for RNF113A:


Pubmed-RNF113A »
Uniprot-RNF113A »
Biogrid-RNF113A »
ProteomicsDB-RNF113A »

Tumorportal-RNF113A »
COSMIC-RNF113A »
GenomeRNAi-RNF113A »
Genecards-RNF113A


Protein-protein Interactions for RNF113A
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait KPNB1 Cat. description Hein, Mann, Cell 2015
Category members IP bait PCDH7 Cat. description Hein, Mann, Cell 2015
Category members IP bait RBM8A Cat. description Hein, Mann, Cell 2015
Category members IP bait RCC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RNF113A Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RNF113A
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_CCCH IPR000571 0.03
Category members Znf_RING IPR001841 0


Protein complexes (CORUM database) featuring RNF113A
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RNF113A
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0046872 metal ion binding Database 0


.

© Copyright Svejstrup Laboratory 2015