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Query: RGPD8

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RGPD8 1 5.149 -0.166 -0.559
RGPD8 1 5.149 1.079 -0.385 0.549 0.456

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RGPD8 Ubiquitylation K2061 0.441 0.872 _GLGNLK(gl)ILK_
RGPD8 Ubiquitylation K106 0.667 _IAELLCK(gl)NDVTDGR_
RGPD8 Ubiquitylation K1220 0.641 _GIGNVK(gl)ILR_
RGPD8 Phosphorylation Y2666 0.598 _NRPDY(ph)VSEEEEDDEDFETAVKK_
RGPD8 Phosphorylation T2293 0.717 0.584 _LNQSGTSVGT(ph)DEESDVTQEEER_
RGPD8 Phosphorylation S796 0.553 0.575 _SYKYS(ph)PK_
RGPD8 Phosphorylation S2668 0.584 0.573 _NRPDYVS(ph)EEEEDDEDFETAVK_
RGPD8 Phosphorylation S3207 0.368 0.527 _IESFGS(ph)PK_
RGPD8 Phosphorylation S1456 0.018 0.508 _SGSSFVHQAS(ph)FK_
RGPD8 Phosphorylation S1573 0.499 _CVACQNPDKPS(ph)PSTSVPAPASFK_
RGPD8 Phosphorylation S2805 -0.018 0.448 _SISS(ph)PSVSSETMDKPVDLSTR_
RGPD8 Phosphorylation S2454 0.335 0.393 _DSLIT(ph)PHVS(ph)R_
RGPD8 Ubiquitylation K2379 -0.664 0.332 _DQVLK(gl)LCANHR_
RGPD8 Ubiquitylation K2358 0.436 0.327 _GIGDIK(gl)ILQNYDNK_
RGPD8 Ubiquitylation K2396 -0.954 0.190 _ITPDMTLQNMK(gl)GTER_
RGPD8 Phosphorylation S2280 0.065 0.135 _SALSPSKS(ph)PAK_
RGPD8 Phosphorylation S2510 -0.171 0.107 _AVVS(ph)PPKFVFGSESVK_
RGPD8 Phosphorylation S1400 -0.440 0.082 _ELVGPPLAETVFT(ph)PKTS(ph)PENVQDR_
RGPD8 Phosphorylation S955 -0.786 0.030 _FESPATGILS(ph)PR_
RGPD8 Phosphorylation S2276 0.074 0.029 _SALS(ph)PSKSPAK_
RGPD8 Ubiquitylation K2935 -1.498 0.007 _SGEEDEEILFK(gl)ER_
RGPD8 Phosphorylation S788 0.362 -0.041 _YSLS(ph)PSK_
RGPD8 Phosphorylation S21 0.047 -0.107 _YIASVQGSTPS(ph)PR_
RGPD8 Ubiquitylation K2592 -0.298 _NSDIEQSSDSK(gl)VK_
RGPD8 Ubiquitylation K2594 -0.298 _NSDIEQSSDSK(gl)VK_
RGPD8 Phosphorylation T1396 -0.510 -0.398 _ELVGPPLAETVFT(ph)PKT(ph)SPENVQDR_
RGPD8 Phosphorylation S2900 -0.395 -0.513 _VGEDEDGS(ph)DEEVVHNEDIHFEPIVSLPEVEVK_
RGPD8 Ubiquitylation K776 -0.046 -0.521 _NADSEIK(gl)HSTPSPTR_
RGPD8 Ubiquitylation K94 -0.527 _SVELNPTQK(gl)DLVLK_
RGPD8 Phosphorylation S2250 1.539 -0.701 _EDALDDSVSSSSVHASPLAS(ph)SPVRK_
RGPD8 Phosphorylation T2613 -0.775 -0.709 _NLFASFPTEESSINYTFKT(ph)PEK_
RGPD8 Ubiquitylation K1963 -0.768 _STSGEGFQFGK(gl)K_
RGPD8 Ubiquitylation K1964 -0.768 _STSGEGFQFGK(gl)K_
RGPD8 Phosphorylation S1160 -1.328 _NHETDGGS(ph)AHGDDDDDGPHFEPVVPLPDKIEVK_
RGPD8 Phosphorylation T1399 -0.665 _ELVGPPLAETVFT(ph)PKT(ph)SPENVQDR_
RGPD8 Phosphorylation S2251 -0.023 _EDALDDSVSSSSVHASPLASS(ph)PVRK_
RGPD8 Ubiquitylation K2650 0.439 _ALATK(gl)LK_
RGPD8 Phosphorylation S2804 0.874 _SIS(ph)SPSVSSETM(ox)DKPVDLSTR_

Background Information for RGPD8:


Pubmed-RGPD8 »
Uniprot-RGPD8 »
Biogrid-RGPD8 »
ProteomicsDB-RGPD8 »

Tumorportal-RGPD8 »
COSMIC-RGPD8 »
GenomeRNAi-RGPD8 »
Genecards-RGPD8


Protein-protein Interactions for RGPD8
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait KPNB1 Cat. description Hein, Mann, Cell 2015
Category members IP bait NUP107 Cat. description Hein, Mann, Cell 2015
Category members IP bait NUP153 Cat. description Hein, Mann, Cell 2015
Category members IP bait NUP98 Cat. description Hein, Mann, Cell 2015
Category members IP bait RANBP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait RCC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait UBE2I Cat. description Hein, Mann, Cell 2015
Category members IP bait AKIRIN2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CTAGE5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ESRP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM136A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IER2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGALS3BP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MLLT6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NXF2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PMF1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PSMC5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RCC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM194A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRAF3IP3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSKS Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSNAX Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait UCHL5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RGPD8
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ran_bind_dom IPR000156 2.46
Category members TPR_1 IPR001440 1.39
Category members TPR-contain_dom IPR013026 0.97
Category members TPR_repeat IPR019734 0.93
Category members TPR_2 IPR013105 0.45
Category members GRIP IPR000237 0.08


Protein complexes (CORUM database) featuring RGPD8
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RGPD8
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005643 nuclear pore Database 6.58
Category members GO Category GO:0046907 intracellular transport Database 3.25
Category members GO Category GO:0008536 Ran GTPase binding Database 0.21
Category members GO Category GO:0000042 protein targeting to Golgi Database 0.2
Category members GO Category GO:0008150 biological_process Database 0


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