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Query: RGPD6

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RGPD6 1 5.149 -0.166 -0.559
RGPD6 1 5.149 1.079 -0.385 0.549 0.456

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RGPD6 Ubiquitylation K2061 0.441 0.872 _GLGNLK(gl)ILK_
RGPD6 Ubiquitylation K106 0.667 _IAELLCK(gl)NDVTDGR_
RGPD6 Ubiquitylation K1220 0.641 _GIGNVK(gl)ILR_
RGPD6 Phosphorylation Y2666 0.598 _NRPDY(ph)VSEEEEDDEDFETAVKK_
RGPD6 Phosphorylation T2293 0.717 0.584 _LNQSGTSVGT(ph)DEESDVTQEEER_
RGPD6 Phosphorylation S796 0.553 0.575 _SYKYS(ph)PK_
RGPD6 Phosphorylation S2668 0.584 0.573 _NRPDYVS(ph)EEEEDDEDFETAVK_
RGPD6 Phosphorylation S3207 0.368 0.527 _IESFGS(ph)PK_
RGPD6 Phosphorylation S1456 0.018 0.508 _SGSSFVHQAS(ph)FK_
RGPD6 Phosphorylation S1573 0.499 _CVACQNPDKPS(ph)PSTSVPAPASFK_
RGPD6 Phosphorylation S2805 -0.018 0.448 _SISS(ph)PSVSSETMDKPVDLSTR_
RGPD6 Phosphorylation S2454 0.335 0.393 _DSLIT(ph)PHVS(ph)R_
RGPD6 Ubiquitylation K2379 -0.664 0.332 _DQVLK(gl)LCANHR_
RGPD6 Ubiquitylation K2358 0.436 0.327 _GIGDIK(gl)ILQNYDNK_
RGPD6 Ubiquitylation K2396 -0.954 0.190 _ITPDMTLQNMK(gl)GTER_
RGPD6 Phosphorylation S2280 0.065 0.135 _SALSPSKS(ph)PAK_
RGPD6 Phosphorylation S2510 -0.171 0.107 _AVVS(ph)PPKFVFGSESVK_
RGPD6 Phosphorylation S1400 -0.440 0.082 _ELVGPPLAETVFT(ph)PKTS(ph)PENVQDR_
RGPD6 Phosphorylation S955 -0.786 0.030 _FESPATGILS(ph)PR_
RGPD6 Phosphorylation S2276 0.074 0.029 _SALS(ph)PSKSPAK_
RGPD6 Ubiquitylation K2935 -1.498 0.007 _SGEEDEEILFK(gl)ER_
RGPD6 Phosphorylation S788 0.362 -0.041 _YSLS(ph)PSK_
RGPD6 Phosphorylation S21 0.047 -0.107 _YIASVQGSTPS(ph)PR_
RGPD6 Ubiquitylation K2592 -0.298 _NSDIEQSSDSK(gl)VK_
RGPD6 Ubiquitylation K2594 -0.298 _NSDIEQSSDSK(gl)VK_
RGPD6 Phosphorylation T1396 -0.510 -0.398 _ELVGPPLAETVFT(ph)PKT(ph)SPENVQDR_
RGPD6 Phosphorylation S2900 -0.395 -0.513 _VGEDEDGS(ph)DEEVVHNEDIHFEPIVSLPEVEVK_
RGPD6 Ubiquitylation K776 -0.046 -0.521 _NADSEIK(gl)HSTPSPTR_
RGPD6 Ubiquitylation K94 -0.527 _SVELNPTQK(gl)DLVLK_
RGPD6 Phosphorylation S2250 1.539 -0.701 _EDALDDSVSSSSVHASPLAS(ph)SPVRK_
RGPD6 Phosphorylation T2613 -0.775 -0.709 _NLFASFPTEESSINYTFKT(ph)PEK_
RGPD6 Ubiquitylation K1963 -0.768 _STSGEGFQFGK(gl)K_
RGPD6 Ubiquitylation K1964 -0.768 _STSGEGFQFGK(gl)K_
RGPD6 Phosphorylation S1160 -1.328 _NHETDGGS(ph)AHGDDDDDGPHFEPVVPLPDKIEVK_
RGPD6 Phosphorylation T1399 -0.665 _ELVGPPLAETVFT(ph)PKT(ph)SPENVQDR_
RGPD6 Phosphorylation S2251 -0.023 _EDALDDSVSSSSVHASPLASS(ph)PVRK_
RGPD6 Ubiquitylation K2650 0.439 _ALATK(gl)LK_
RGPD6 Phosphorylation S2804 0.874 _SIS(ph)SPSVSSETM(ox)DKPVDLSTR_

Background Information for RGPD6:





Protein-protein Interactions for RGPD6

Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in RGPD6

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ran_bind_dom IPR000156 2.46
Category members TPR_1 IPR001440 1.39
Category members TPR-contain_dom IPR013026 0.97
Category members TPR_repeat IPR019734 0.93
Category members TPR_2 IPR013105 0.45
Category members GRIP IPR000237 0.08


Protein complexes (CORUM database) featuring RGPD6

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RGPD6

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0046907 intracellular transport Database 3.25
Category members GO Category GO:0000042 protein targeting to Golgi Database 0.2


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