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Query: RFX5

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RFX5 1 4.619 -1.890 3.510 0.978

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RFX5 Phosphorylation S10 -0.008 0.139 _(ac)AEDEPDAKS(ph)PK_
RFX5 Phosphorylation S185 -0.017 -0.414 _GSES(ph)PEMGPEVTPAPR_
RFX5 Phosphorylation S183 -0.273 _GS(ph)ESPEM(ox)GPEVTPAPR_

Background Information for RFX5:


Pubmed-RFX5 »
Uniprot-RFX5 »
Biogrid-RFX5 »
ProteomicsDB-RFX5 »

Tumorportal-RFX5 »
COSMIC-RFX5 »
GenomeRNAi-RFX5 »
Genecards-RFX5


Protein-protein Interactions for RFX5
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait RFX5 Cat. description Hein, Mann, Cell 2015


Protein Domains in RFX5
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members DNA-bd_RFX IPR003150 0
Category members DNA_primase/NTPase_C IPR004968 0


Protein complexes (CORUM database) featuring RFX5
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RFX5
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members Pathway Pathway_767 KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION 0 0.09
Category members GO Category GO:0000122 negative regulation of transcription from RNA polymerase II promoter Database 0.02
Category members Pathway Pathway_207 KEGG_PRIMARY_IMMUNODEFICIENCY 0 0
Category members Disease phenotype BARE_LYMPHOCYTE_SYNDROME_TYPE_II BARE LYMPHOCYTE SYNDROME TYPE II Database 0
Category members Disease phenotype Immunodeficiency_by_defective_expression_of_HLA_class_2 Immunodeficiency by defective expression of HLA class 2 Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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