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Query: RFX1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RFX1 0 -1.006 0.240 -0.230 -1.319 0.299 0.084

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RFX1 Phosphorylation T164 0.082 -0.152 _PGHVSPLQLT(ph)NIQVPQQALPTQR_

Background Information for RFX1:





Protein-protein Interactions for RFX1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ARRB2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FBXL3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FOXJ1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FOXN2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FOXN3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HSPB8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait INPP5K Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPATA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RFX1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members DNA-bd_RFX IPR003150 0
Category members RFX1_trans_act IPR007668 0


Protein complexes (CORUM database) featuring RFX1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RFX1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006955 immune response Database 1.22
Category members GO Category GO:0003705 RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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