bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: RETSAT

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RETSAT 0 2.871 -1.280 2.190 0.527 0.154

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for RETSAT:


Pubmed-RETSAT »
Uniprot-RETSAT »
Biogrid-RETSAT »
ProteomicsDB-RETSAT »

Tumorportal-RETSAT »
COSMIC-RETSAT »
GenomeRNAi-RETSAT »
Genecards-RETSAT


Protein-protein Interactions for RETSAT
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait C21orf63 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CDHR5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM63B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GDPD5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IL17RB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IL9R Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KCNS3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LRRTM1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHA3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHB16 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHGA5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHGB4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PMEL Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SCN3B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPINT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMPRSS3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TPRA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RETSAT
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Amino_oxidase IPR002937 0
Category members mOase_FAD-bd IPR002938 0
Category members FAD_bind_dom IPR003953 0
Category members FAD-dep_OxRdtase IPR006076 0
Category members Pyr_nucl-diS_OxRdtase_FAD/NAD IPR023753 0


Protein complexes (CORUM database) featuring RETSAT
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RETSAT
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0031965 nuclear membrane Database 2.59
Category members GO Category GO:0005789 endoplasmic reticulum membrane Database 1.57
Category members GO Category GO:0005640 nuclear outer membrane Database 0.18
Category members Pathway Pathway_87 KEGG_RETINOL_METABOLISM 0 0
Category members GO Category GO:0016491 oxidoreductase activity Database 0
Category members GO Category GO:0042572 retinol metabolic process Database 0
Category members GO Category GO:0055114 oxidation-reduction process Database 0


.

© Copyright Svejstrup Laboratory 2015