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bioLOGIC Data

Query: RBM27

RNAi screen result	RNAPII IP (PI)	CSB IP	CSB IP (PI)	Chrom.	Chrom. (PI)	Phosphorylation	Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
RBM27	0	1.021						0.413	0.252

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
RBM27	Phosphorylation	S120	0.156	0.200	_KYPS(ph)PQK_

Background Information for RBM27:

Pubmed-RBM27 »

Uniprot-RBM27 »

Biogrid-RBM27 »

ProteomicsDB-RBM27 »

Tumorportal-RBM27 »

COSMIC-RBM27 »

GenomeRNAi-RBM27 »

Genecards-RBM27

Protein-protein Interactions for RBM27

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait ACTR2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait PLK2	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SRSF1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait THOC1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait THOC7	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait YWHAZ	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait ZFC3H1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait C10orf125	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CHCHD10	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CHST8	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CLEC3A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait DUSP23	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait GTF3C2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ID2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait IKZF5	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait JMJD6	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait LUC7L	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RNF111	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait SFPQ	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait SRPK1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TMEM223	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TNFRSF13B	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in RBM27

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	RRM_dom	IPR000504	4.34
Category members	Znf_CCCH	IPR000571	0.03
Category members	PWI_dom	IPR002483	0

Protein complexes (CORUM database) featuring RBM27

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring RBM27

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	DDR Literature	pubmedid:24332808	Marechal et al., 2014 RPA-mediated recruitment		INF
Category members	GO Category	GO:0003723	RNA binding	Database	INF
Category members	GO Category	GO:0005634	nucleus	Database	INF
Category members	GO Category	GO:0005737	cytoplasm	Database	12.81
Category members	GO Category	GO:0000166	nucleotide binding	Database	5.91
Category members	GO Category	GO:0016607	nuclear speck	Database	4.84
Category members	GO Category	GO:0006397	mRNA processing	Database	3.76
Category members	DDR Literature	pubmedid:19647519	Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation		3.6
Category members	GO Category	GO:0003676	nucleic acid binding	Database	0.83
Category members	GO Category	GO:0046872	metal ion binding	Database	0