bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: PTBP2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PTBP2 2 0.861 -1.420 3.200 -0.768 -1.756
PTBP2 2 0.861 -1.420 3.200 -0.924 -0.838

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PTBP2 Ubiquitylation K145 0.581 0.885 _ELK(gl)TDNTLNQR_
PTBP2 Phosphorylation S316 -1.092 -0.631 _ETSLLAVPGALS(ph)PLAIPNAAAAAAAAAAGR_
PTBP2 Ubiquitylation K491 2.017 _TLFANTGGTVK(gl)AFK_

Background Information for PTBP2:


Pubmed-PTBP2 »
Uniprot-PTBP2 »
Biogrid-PTBP2 »
ProteomicsDB-PTBP2 »

Tumorportal-PTBP2 »
COSMIC-PTBP2 »
GenomeRNAi-PTBP2 »
Genecards-PTBP2


Protein-protein Interactions for PTBP2
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in PTBP2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RRM_dom IPR000504 4.34
Category members HnRNP-L_PTB IPR006536 0


Protein complexes (CORUM database) featuring PTBP2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1288 DCS complex (PTBP1, PTBP2, HNRPH1, HNRPF) Database 0


Categories featuring PTBP2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0005681 spliceosomal complex Database 3.88
Category members GO Category GO:0006397 mRNA processing Database 3.76
Category members GO Category GO:0003729 mRNA binding Database 1.38
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0006376 mRNA splice site selection Database 0.63
Category members GO Category GO:0033119 negative regulation of RNA splicing Database 0


.

© Copyright Svejstrup Laboratory 2015