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Query: PRPF38B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PRPF38B 0 2.695 -0.800 0.910 0.141 -0.167 0.120

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PRPF38B Phosphorylation S289 0.677 _EGHGSS(ph)SFDRELER_
PRPF38B Phosphorylation S288 0.519 _EGHGS(ph)SSFDRELER_
PRPF38B Phosphorylation S290 0.180 0.481 _EGHGSSS(ph)FDRELER_
PRPF38B Phosphorylation S527 1.014 0.339 _S(ph)QSIEQESQEK_
PRPF38B Phosphorylation S529 0.441 0.261 _SQS(ph)IEQESQEK_

Background Information for PRPF38B:


Pubmed-PRPF38B »
Uniprot-PRPF38B »
Biogrid-PRPF38B »
ProteomicsDB-PRPF38B »

Tumorportal-PRPF38B »
COSMIC-PRPF38B »
GenomeRNAi-PRPF38B »
Genecards-PRPF38B


Protein-protein Interactions for PRPF38B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BSDC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait TBC1D9 Cat. description Hein, Mann, Cell 2015
Category members IP bait WRAP53 Cat. description Hein, Mann, Cell 2015
Category members IP bait CLK3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait JMJD6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LUC7L Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZC3H18 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PRPF38B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members PRP38 IPR005037 0


Protein complexes (CORUM database) featuring PRPF38B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PRPF38B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members Pathway Pathway_851 KEGG_SPLICEOSOME 0 7.94
Category members GO Category GO:0005681 spliceosomal complex Database 3.88
Category members GO Category GO:0006397 mRNA processing Database 3.76


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