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Query: PDXDC1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PDXDC1 1 2.373 -0.730 0.900 -0.449
PDXDC1 1 2.373 0.140 -0.500 -0.449

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PDXDC1 Ubiquitylation K39 0.080 _NLK(gl)EAVK_
PDXDC1 Ubiquitylation K390 -0.155 _LQESLK(gl)K_
PDXDC1 Phosphorylation S775 2.102 -0.260 _LSSGPEQITLEASSTEGHPGAPS(ph)PQHTDQTEAFQK_
PDXDC1 Ubiquitylation K586 -0.671 _IGPEYK(gl)SMK_
PDXDC1 Ubiquitylation K43 -1.859 _EAVK(gl)MLEDSQR_

Background Information for PDXDC1:


Pubmed-PDXDC1 »
Uniprot-PDXDC1 »
Biogrid-PDXDC1 »
ProteomicsDB-PDXDC1 »

Tumorportal-PDXDC1 »
COSMIC-PDXDC1 »
GenomeRNAi-PDXDC1 »
Genecards-PDXDC1


Protein-protein Interactions for PDXDC1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BMPR1A Cat. description Hein, Mann, Cell 2015
Category members IP bait APLNR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ARL13B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CD244 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CD70 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CHRM4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EDNRB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM174A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAS Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FPR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPR77 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HS1BP3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HTR2C Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LAMP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LPAR6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PTGIR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC15A1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC18A1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC22A6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC2A12 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC39A9 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM108 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM184A Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PDXDC1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members PyrdxlP-dep_de-COase IPR002129 0
Category members PyrdxlP-dep_Trfase IPR015424 0


Protein complexes (CORUM database) featuring PDXDC1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PDXDC1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016831 carboxy-lyase activity Database 0
Category members GO Category GO:0019752 carboxylic acid metabolic process Database 0
Category members GO Category GO:0030170 pyridoxal phosphate binding Database 0


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