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Query: PDLIM5

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PDLIM5 0 -3.954 1.140 -0.380 -1.070 -2.314 -1.060
PDLIM5 0 -3.954 1.140 -0.380 -0.801

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PDLIM5 Phosphorylation S309 1.245 _KANNS(ph)QEPSPQLASSVASTR_
PDLIM5 Phosphorylation S111 -0.836 -0.391 _EVVKPVPITS(ph)PAVSK_
PDLIM5 Phosphorylation T110 -1.475 -0.604 _EVVKPVPIT(ph)SPAVSK_
PDLIM5 Phosphorylation S137 -1.050 -0.751 _PFGSVSS(ph)PK_
PDLIM5 Ubiquitylation K415 -0.188 _AEHIPAGK(gl)R_

Background Information for PDLIM5:


Pubmed-PDLIM5 »
Uniprot-PDLIM5 »
Biogrid-PDLIM5 »
ProteomicsDB-PDLIM5 »

Tumorportal-PDLIM5 »
COSMIC-PDLIM5 »
GenomeRNAi-PDLIM5 »
Genecards-PDLIM5


Protein-protein Interactions for PDLIM5
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait PDLIM5 Cat. description Hein, Mann, Cell 2015
Category members IP bait ATG14 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DENR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EMILIN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait METTL6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NFATC2IP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PDLIM7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PHF19 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RWDD2B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TULP3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PDLIM5
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members PDZ IPR001478 0.15
Category members Znf_LIM IPR001781 0


Protein complexes (CORUM database) featuring PDLIM5
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PDLIM5
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0003779 actin binding Database 5.41
Category members GO Category GO:0015629 actin cytoskeleton Database 2.22
Category members GO Category GO:0047485 protein N-terminus binding Database 1.84
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0030018 Z disc Database 0.32
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0061001 regulation of dendritic spine morphogenesis Database 0.23
Category members GO Category GO:0043005 neuron projection Database 0.08
Category members GO Category GO:0045211 postsynaptic membrane Database 0.06
Category members GO Category GO:0005080 protein kinase C binding Database 0.04
Category members GO Category GO:0014069 postsynaptic density Database 0
Category members GO Category GO:0030054 cell junction Database 0
Category members GO Category GO:0042805 actinin binding Database 0
Category members GO Category GO:0051963 regulation of synapse assembly Database 0


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