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Query: PDLIM1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PDLIM1 1 1.271 -1.570 3.160 0.344 -0.255 -0.631

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PDLIM1 Phosphorylation S90 -1.116 -0.231 _VWS(ph)PLVTEEGK_
PDLIM1 Phosphorylation S130 -0.475 _SAMPFTAS(ph)PASSTTAR_

Background Information for PDLIM1:


Pubmed-PDLIM1 »
Uniprot-PDLIM1 »
Biogrid-PDLIM1 »
ProteomicsDB-PDLIM1 »

Tumorportal-PDLIM1 »
COSMIC-PDLIM1 »
GenomeRNAi-PDLIM1 »
Genecards-PDLIM1


Protein-protein Interactions for PDLIM1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CEP55 Cat. description Hein, Mann, Cell 2015
Category members IP bait FBXO31 Cat. description Hein, Mann, Cell 2015
Category members IP bait LIMA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait PDLIM1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SOX2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PDLIM1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members PDZ IPR001478 0.15
Category members Znf_LIM IPR001781 0
Category members ZASP IPR006643 0


Protein complexes (CORUM database) featuring PDLIM1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PDLIM1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0003713 transcription coactivator activity Database 3.68
Category members GO Category GO:0005856 cytoskeleton Database 0.63
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0005667 transcription factor complex Database 0.19
Category members GO Category GO:0001666 response to hypoxia Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0006979 response to oxidative stress Database 0


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