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Query: PDCD6IP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PDCD6IP 0 2.978 0.630 -0.660 0.463 0.427
PDCD6IP 0 2.978 0.630 -0.660 -0.684
PDCD6IP 0 2.978 0.630 -0.660 -0.005
PDCD6IP 0 2.978 0.900 -0.700 0.463 0.427
PDCD6IP 0 2.978 0.900 -0.700 -0.684
PDCD6IP 0 2.978 0.900 -0.700 -0.005

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PDCD6IP Ubiquitylation K643 0.740 1.299 _NIQVSHQEFSK(gl)MK_
PDCD6IP Ubiquitylation K48 0.146 1.126 _AAEELSK(gl)LRR_
PDCD6IP Ubiquitylation K506 0.448 0.979 _TVLDK(gl)AVQADGQVK_
PDCD6IP Ubiquitylation K355 0.038 0.637 _STPVNVPISQK(gl)FTDLFEK_
PDCD6IP Ubiquitylation K645 0.794 0.393 _MK(gl)QSNNEANLREEVLK_
PDCD6IP Ubiquitylation K344 -0.236 -0.168 _ATLVK(gl)STPVNVPISQK_
PDCD6IP Ubiquitylation K209 -0.860 _DKMK(gl)DAIIAK_
PDCD6IP Ubiquitylation K491 -0.502 _TPSNELYK(gl)PLR_
PDCD6IP Ubiquitylation K712 -0.540 _DELLK(gl)DLQQSIAR_

Background Information for PDCD6IP:


Pubmed-PDCD6IP »
Uniprot-PDCD6IP »
Biogrid-PDCD6IP »
ProteomicsDB-PDCD6IP »

Tumorportal-PDCD6IP »
COSMIC-PDCD6IP »
GenomeRNAi-PDCD6IP »
Genecards-PDCD6IP


Protein-protein Interactions for PDCD6IP
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CD2AP Cat. description Hein, Mann, Cell 2015
Category members IP bait CHMP4B Cat. description Hein, Mann, Cell 2015
Category members IP bait CNTROB Cat. description Hein, Mann, Cell 2015
Category members IP bait GOLT1B Cat. description Hein, Mann, Cell 2015
Category members IP bait PTPN23 Cat. description Hein, Mann, Cell 2015
Category members IP bait RANBP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait SPAST Cat. description Hein, Mann, Cell 2015
Category members IP bait TFG Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS4B Cat. description Hein, Mann, Cell 2015


Protein Domains in PDCD6IP
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members BRO1_dom IPR004328 0


Protein complexes (CORUM database) featuring PDCD6IP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PDCD6IP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0016032 viral process Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0019048 modulation by virus of host morphology or physiology Database 7.81
Category members GO Category GO:0042470 melanosome Database 5.59
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0006915 apoptotic process Database 2.12
Category members Pathway Pathway_666 KEGG_ENDOCYTOSIS 0 1.25
Category members GO Category GO:0051301 cell division Database 1.15
Category members GO Category GO:0007049 cell cycle Database 0.69
Category members GO Category GO:0005815 microtubule organizing center Database 0.39
Category members GO Category GO:0048306 calcium-dependent protein binding Database 0.17
Category members GO Category GO:0017124 SH3 domain binding Database 0
Category members GO Category GO:0046983 protein dimerization activity Database 0


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