bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: PCNP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PCNP 0 0.389 0.280 0.210 -0.323 0.358

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PCNP Phosphorylation S108 -0.215 0.159 _KASAIS(ph)IK_
PCNP Phosphorylation S168 -0.695 -0.446 _DTPTSAGPNS(ph)FNK_
PCNP Phosphorylation S129 -0.368 -0.632 _TLS(ph)VAAAFNEDEDSEPEEMPPEAK_
PCNP Phosphorylation S140 -0.513 -0.714 _TLSVAAAFNEDEDS(ph)EPEEM(ox)PPEAK_
PCNP Ubiquitylation K91 -1.140 _SAEEEAADLPTKPTKISK(gl)_
PCNP Ubiquitylation K103 0.410 _K(gl)ASAISIK_

Background Information for PCNP:


Pubmed-PCNP »
Uniprot-PCNP »
Biogrid-PCNP »
ProteomicsDB-PCNP »

Tumorportal-PCNP »
COSMIC-PCNP »
GenomeRNAi-PCNP »
Genecards-PCNP


Protein-protein Interactions for PCNP
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait EMC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait JUNB Cat. description Hein, Mann, Cell 2015
Category members IP bait KIFC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MIS12 Cat. description Hein, Mann, Cell 2015
Category members IP bait MMGT1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait PTPN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait USP11 Cat. description Hein, Mann, Cell 2015
Category members IP bait XRCC3 Cat. description Hein, Mann, Cell 2015


Protein Domains in PCNP
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring PCNP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PCNP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0007049 cell cycle Database 0.69
Category members GO Category GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process Database 0.23
Category members GO Category GO:0016567 protein ubiquitination Database 0.07


.

© Copyright Svejstrup Laboratory 2015