bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: PCGF1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PCGF1 0 1.205 1.320 -1.280 -0.143 0.201

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PCGF1 Phosphorylation S3 0.334 0.181 _(ac)AS(ph)PQGGQIAIAM(ox)R_
PCGF1 Ubiquitylation K190 0.632 _SVLQNK(gl)YVR_

Background Information for PCGF1:


Pubmed-PCGF1 »
Uniprot-PCGF1 »
Biogrid-PCGF1 »
ProteomicsDB-PCGF1 »

Tumorportal-PCGF1 »
COSMIC-PCGF1 »
GenomeRNAi-PCGF1 »
Genecards-PCGF1


Protein-protein Interactions for PCGF1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BCOR Cat. description Hein, Mann, Cell 2015
Category members IP bait PCGF1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RING1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RNF2 Cat. description Hein, Mann, Cell 2015
Category members IP bait USP7 Cat. description Hein, Mann, Cell 2015
Category members IP bait CBX7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FCHO1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RYBP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait YAF2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PCGF1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_RING IPR001841 0
Category members Znf_C3HC4_RING-type IPR018957 0


Protein complexes (CORUM database) featuring PCGF1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1178 BCOR complex Database 0.34


Categories featuring PCGF1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0008022 protein C-terminus binding Database 1.43
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0031519 PcG protein complex Database 0.62
Category members GO Category GO:0035518 histone H2A monoubiquitination Database 0.34
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


.

© Copyright Svejstrup Laboratory 2015