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bioLOGIC Data

Query: PCDH7

RNAi screen result	RNAPII IP (PI)	CSB IP	CSB IP (PI)	Chrom.	Chrom. (PI)	Phosphorylation	Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
PCDH7	0	2.057	0.570	-0.960

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
PCDH7	Phosphorylation	S1185	0.853	0.538	_LSTFMPVDERGS(ph)QEK_
PCDH7	Phosphorylation	S974	0.057	-0.031	_LSDS(ph)PSMGR_
PCDH7	Phosphorylation	S1011	-0.627	-0.594	_SSSPLPTVQLHPQS(ph)PTAGK_
PCDH7	Phosphorylation	S1000		-1.030	_SSS(ph)PLPTVQLHPQS(ph)PTAGK_
PCDH7	Ubiquitylation	K970	0.666		_YDSVNEK(gl)LSDSPSMGR_

Background Information for PCDH7:

Pubmed-PCDH7 »

Uniprot-PCDH7 »

Biogrid-PCDH7 »

ProteomicsDB-PCDH7 »

Tumorportal-PCDH7 »

COSMIC-PCDH7 »

GenomeRNAi-PCDH7 »

Genecards-PCDH7

Protein-protein Interactions for PCDH7

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait GOLT1B	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait PCDH7	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RAB5C	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RAF1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TACC3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait XRCC5	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait C2orf48	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait C3orf26	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait DKKL1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait FCGR1A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait FCGRT	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait FLRT1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait HUS1B	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait KLK5	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait NXPH2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PCDH12	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PCDH20	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PCDHGB1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait SIRT6	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TMEM30B	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait XAGE1A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in PCDH7

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	Cadherin	IPR002126	0.32
Category members	Cadherin-like	IPR015919	0.21
Category members	Cadherin_N	IPR013164	0.08
Category members	Protocadherin	IPR013585	0

Protein complexes (CORUM database) featuring PCDH7

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring PCDH7

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0016021	integral to membrane	Database	7.67
Category members	GO Category	GO:0005887	integral to plasma membrane	Database	1.69
Category members	GO Category	GO:0005886	plasma membrane	Database	1.21
Category members	GO Category	GO:0016020	membrane	Database	0.52
Category members	GO Category	GO:0007156	homophilic cell adhesion	Database	0.28
Category members	GO Category	GO:0005509	calcium ion binding	Database	0.11