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Query: PCCB

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PCCB 0 0.630 -1.340 1.860

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PCCB Ubiquitylation K404 -1.230 _VASGCLDINSSVK(gl)GAR_

Background Information for PCCB:


Pubmed-PCCB »
Uniprot-PCCB »
Biogrid-PCCB »
ProteomicsDB-PCCB »

Tumorportal-PCCB »
COSMIC-PCCB »
GenomeRNAi-PCCB »
Genecards-PCCB


Protein-protein Interactions for PCCB
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait PCCA Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PCCB
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Carboxyl_trans IPR000022 0.13
Category members COA_CT_N IPR011762 0.13
Category members COA_CT_C IPR011763 0.13
Category members ClpP/crotonase-like_dom IPR029045 0.08


Protein complexes (CORUM database) featuring PCCB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PCCB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members Pathway Pathway_28 KEGG_PROPANOATE_METABOLISM 0 1.89
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0005759 mitochondrial matrix Database 0.59
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0006767 water-soluble vitamin metabolic process Database 0.27
Category members Pathway Pathway_1 REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM 0 0.23
Category members GO Category GO:0006766 vitamin metabolic process Database 0.23
Category members Disease phenotype PROPIONIC_ACIDEMIA PROPIONIC ACIDEMIA Database 0.13
Category members GO Category GO:0004658 propionyl-CoA carboxylase activity Database 0.13
Category members Pathway Pathway_145 REACTOME_MITOCHONDRIAL_FATTY_ACID_BETA_OXIDATION 0 0.05
Category members Pathway Pathway_19 KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION 0 0.04
Category members GO Category GO:0006768 biotin metabolic process Database 0.02
Category members Pathway Pathway_4 REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS 0 0
Category members GO Category GO:0003989 acetyl-CoA carboxylase activity Database 0
Category members GO Category GO:0006633 fatty acid biosynthetic process Database 0
Category members GO Category GO:0006635 fatty acid beta-oxidation Database 0
Category members GO Category GO:0016874 ligase activity Database 0
Category members GO Category GO:0019626 short-chain fatty acid catabolic process Database 0
Category members GO Category GO:0044255 cellular lipid metabolic process Database 0


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