bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: PALM

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PALM 0 2.236 -0.630 1.420

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PALM Phosphorylation S124 -0.311 -0.339 _ENAAAPS(ph)PVRAPAPS(ph)PAKEER_
PALM Phosphorylation S116 1.155 -1.415 _ENAAAPS(ph)PVRAPAPS(ph)PAKEER_

Background Information for PALM:


Pubmed-PALM »
Uniprot-PALM »
Biogrid-PALM »
ProteomicsDB-PALM »

Tumorportal-PALM »
COSMIC-PALM »
GenomeRNAi-PALM »
Genecards-PALM


Protein-protein Interactions for PALM
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CORO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait DBN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait FLNA Cat. description Hein, Mann, Cell 2015
Category members IP bait FLNB Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH9 Cat. description Hein, Mann, Cell 2015
Category members IP bait SYNPO Cat. description Hein, Mann, Cell 2015
Category members IP bait TMOD3 Cat. description Hein, Mann, Cell 2015
Category members IP bait DUSP22 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FYTTD1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GJB7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HOXB5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MED21 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RABGGTB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM185A Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PALM
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Paralemmin IPR004965 0


Protein complexes (CORUM database) featuring PALM
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PALM
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005887 integral to plasma membrane Database 1.69
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0031527 filopodium membrane Database 0.74
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0008104 protein localization Database 0.5
Category members GO Category GO:0006928 cellular component movement Database 0.24
Category members GO Category GO:0030424 axon Database 0.23
Category members GO Category GO:0016023 cytoplasmic membrane-bounded vesicle Database 0.17
Category members GO Category GO:0071257 cellular response to electrical stimulus Database 0.08
Category members GO Category GO:0030175 filopodium Database 0.05
Category members GO Category GO:0030818 negative regulation of cAMP biosynthetic process Database 0.04
Category members GO Category GO:0016323 basolateral plasma membrane Database 0.04
Category members GO Category GO:0016327 apicolateral plasma membrane Database 0.04
Category members GO Category GO:0032590 dendrite membrane Database 0.01
Category members GO Category GO:0007010 cytoskeleton organization Database 0
Category members GO Category GO:0007194 negative regulation of adenylate cyclase activity Database 0
Category members GO Category GO:0008360 regulation of cell shape Database 0
Category members GO Category GO:0031750 D3 dopamine receptor binding Database 0
Category members GO Category GO:0032591 dendritic spine membrane Database 0
Category members GO Category GO:0044309 neuron spine Database 0
Category members GO Category GO:0051491 positive regulation of filopodium assembly Database 0
Category members GO Category GO:0060074 synapse maturation Database 0
Category members GO Category GO:0060160 negative regulation of dopamine receptor signaling pathway Database 0
Category members GO Category GO:0060999 positive regulation of dendritic spine development Database 0


.

© Copyright Svejstrup Laboratory 2015