bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: NXT1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
NXT1 0 0.997 -0.670 0.570

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
NXT1 Ubiquitylation K7 0.427 _(ac)ASVDFK(gl)TYVDQACR_

Background Information for NXT1:


Pubmed-NXT1 »
Uniprot-NXT1 »
Biogrid-NXT1 »
ProteomicsDB-NXT1 »

Tumorportal-NXT1 »
COSMIC-NXT1 »
GenomeRNAi-NXT1 »
Genecards-NXT1


Protein-protein Interactions for NXT1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait NUP107 Cat. description Hein, Mann, Cell 2015
Category members IP bait NUP98 Cat. description Hein, Mann, Cell 2015
Category members IP bait RANBP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait BZW2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NXF1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NXF2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in NXT1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members NTF2 IPR002075 0
Category members Nuclear_transport_factor_2_euk IPR018222 0


Protein complexes (CORUM database) featuring NXT1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring NXT1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005643 nuclear pore Database 6.58
Category members GO Category GO:0016607 nuclear speck Database 4.84
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0006405 RNA export from nucleus Database 0.24
Category members GO Category GO:0008536 Ran GTPase binding Database 0.21
Category members Pathway Pathway_1164 SA_G1_AND_S_PHASES 0 0
Category members GO Category GO:0006611 protein export from nucleus Database 0
Category members GO Category GO:0006810 transport Database 0


.

© Copyright Svejstrup Laboratory 2015