bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: NSRP1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
NSRP1 0 0.710 -1.150 1.990
NSRP1 0 0.710 -1.150 1.990 0.183 -0.111

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
NSRP1 Phosphorylation S33 -0.293 _TQQLHPVLQKPSVFGNDS(ph)DDDDETSVSESLQR_
NSRP1 Phosphorylation T275 -1.059 -0.873 _VIET(ph)PENDFK_

Background Information for NSRP1:





Protein-protein Interactions for NSRP1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CHORDC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait EMC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait JUNB Cat. description Hein, Mann, Cell 2015
Category members IP bait MMGT1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait XRCC3 Cat. description Hein, Mann, Cell 2015


Protein Domains in NSRP1

Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring NSRP1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring NSRP1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0030529 ribonucleoprotein complex Database 8.45
Category members GO Category GO:0016607 nuclear speck Database 4.84
Category members GO Category GO:0006397 mRNA processing Database 3.76
Category members GO Category GO:0006913 nucleocytoplasmic transport Database 2.96
Category members GO Category GO:0003729 mRNA binding Database 1.38
Category members GO Category GO:0000381 regulation of alternative mRNA splicing, via spliceosome Database 0.5
Category members GO Category GO:0032502 developmental process Database 0


© Copyright Svejstrup Laboratory 2015