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Query: NMD3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
NMD3 0 -0.755 0.860 -0.300 -0.415 0.019
NMD3 0 -0.755 0.860 -0.300 -0.039

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
NMD3 Phosphorylation T470 -0.093 0.056 _DSAIPVESDT(ph)DDEGAPR_
NMD3 Phosphorylation S468 0.416 -0.038 _DSAIPVES(ph)DTDDEGAPR_
NMD3 Ubiquitylation K357 -0.792 _TSEMNTDK(gl)QYFCR_

Background Information for NMD3:


Pubmed-NMD3 »
Uniprot-NMD3 »
Biogrid-NMD3 »
ProteomicsDB-NMD3 »

Tumorportal-NMD3 »
COSMIC-NMD3 »
GenomeRNAi-NMD3 »
Genecards-NMD3


Protein-protein Interactions for NMD3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CPEB1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DTX3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GCLC Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPD1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GSTT2B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KLHDC2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NMD3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SFTA2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ST8SIA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in NMD3
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring NMD3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring NMD3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members DDR Literature pubmedid:TBD2_UV_increased Elia et al, 2015 UV increased acetylation events Elia et al. INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0015031 protein transport Database 3.48


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