bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: NDFIP2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
NDFIP2 0 -1.192 0.800 -0.570

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
NDFIP2 Ubiquitylation K193 -1.120 -0.072 _AK(gl)AAAM(ox)AAAAAETSQR_

Background Information for NDFIP2:


Pubmed-NDFIP2 »
Uniprot-NDFIP2 »
Biogrid-NDFIP2 »
ProteomicsDB-NDFIP2 »

Tumorportal-NDFIP2 »
COSMIC-NDFIP2 »
GenomeRNAi-NDFIP2 »
Genecards-NDFIP2


Protein-protein Interactions for NDFIP2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait FAM8A1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSPAN3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in NDFIP2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members NEDD4/BSD2 IPR019325 0.29


Protein complexes (CORUM database) featuring NDFIP2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring NDFIP2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members GO Category GO:0048471 perinuclear region of cytoplasm Database 0.39
Category members GO Category GO:0050699 WW domain binding Database 0.36
Category members GO Category GO:0005794 Golgi apparatus Database 0.27
Category members GO Category GO:0051224 negative regulation of protein transport Database 0.07
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0004871 signal transducer activity Database 0
Category members GO Category GO:0007165 signal transduction Database 0
Category members GO Category GO:0010629 negative regulation of gene expression Database 0
Category members GO Category GO:0031398 positive regulation of protein ubiquitination Database 0
Category members GO Category GO:0032410 negative regulation of transporter activity Database 0
Category members GO Category GO:0032585 multivesicular body membrane Database 0
Category members GO Category GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling Database 0


.

© Copyright Svejstrup Laboratory 2015