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Query: MKRN1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
MKRN1 0 -0.931 0.220 -0.170

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
MKRN1 Ubiquitylation K368 0.277 _YKEAMSNK(gl)ACR_
MKRN1 Ubiquitylation K326 -1.208 -0.963 _QFESK(gl)IIK_
MKRN1 Ubiquitylation K329 -1.179 _IIK(gl)SCPECR_

Background Information for MKRN1:


Pubmed-MKRN1 »
Uniprot-MKRN1 »
Biogrid-MKRN1 »
ProteomicsDB-MKRN1 »

Tumorportal-MKRN1 »
COSMIC-MKRN1 »
GenomeRNAi-MKRN1 »
Genecards-MKRN1


Protein-protein Interactions for MKRN1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CELF3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GLTSCR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LUC7L Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LUC7L2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RBFOX1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RRS1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNIP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNRNP70 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRA2A Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in MKRN1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_CCCH IPR000571 0.03
Category members Znf_RING IPR001841 0
Category members Znf_C3HC4_RING-type IPR018957 0


Protein complexes (CORUM database) featuring MKRN1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring MKRN1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0003682 chromatin binding Database 6.07
Category members Pathway Pathway_621 REACTOME_ADAPTIVE_IMMUNE_SYSTEM 0 4.72
Category members Pathway Pathway_458 REACTOME_IMMUNE_SYSTEM 0 3
Category members Pathway Pathway_764 REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION 0 2.56
Category members Pathway Pathway_832 REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION 0 1.58
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0003674 molecular_function Database 0.08
Category members GO Category GO:0016567 protein ubiquitination Database 0.07
Category members GO Category GO:0005575 cellular_component Database 0
Category members GO Category GO:0008150 biological_process Database 0
Category members GO Category GO:0016874 ligase activity Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


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