bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: MEF2B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
MEF2B 0 -0.140 0.370 -0.250

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
MEF2B Ubiquitylation K23 -0.140 _QVTFTK(gl)R_

Background Information for MEF2B:





Protein-protein Interactions for MEF2B

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait MEF2B Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in MEF2B

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members TF_MADSbox IPR002100 0


Protein complexes (CORUM database) featuring MEF2B

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring MEF2B

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0005667 transcription factor complex Database 0.19
Category members GO Category GO:0042826 histone deacetylase binding Database 0.16
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0007517 muscle organ development Database 0
Category members GO Category GO:0046983 protein dimerization activity Database 0


© Copyright Svejstrup Laboratory 2015