bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: LUC7L3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LUC7L3 1 4.994 -2.000 2.980 1.132 0.812 0.518 0.081 0.231
LUC7L3 1 4.994 0.670 -0.310 1.132 0.812 0.518 0.081 0.231

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LUC7L3 Ubiquitylation K23 -0.126 -0.635 _NLAPDEK(gl)R_

Background Information for LUC7L3:


Pubmed-LUC7L3 »
Uniprot-LUC7L3 »
Biogrid-LUC7L3 »
ProteomicsDB-LUC7L3 »

Tumorportal-LUC7L3 »
COSMIC-LUC7L3 »
GenomeRNAi-LUC7L3 »
Genecards-LUC7L3


Protein-protein Interactions for LUC7L3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait AKAP5 Cat. description Hein, Mann, Cell 2015
Category members IP bait NABP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait NLRP3 Cat. description Hein, Mann, Cell 2015
Category members IP bait SYN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait JMJD6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LUC7L3
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Luc7-rel IPR004882 0.72


Protein complexes (CORUM database) featuring LUC7L3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 351 Spliceosome Database 9.3


Categories featuring LUC7L3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0016607 nuclear speck Database 4.84
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0003729 mRNA binding Database 1.38
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0005685 U1 snRNP Database 0.77
Category members GO Category GO:0005925 focal adhesion Database 0.68
Category members GO Category GO:0006376 mRNA splice site selection Database 0.63


.

© Copyright Svejstrup Laboratory 2015