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Query: LRRC58

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LRRC58 0 -1.759 0.830 -0.470

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LRRC58 Ubiquitylation K321 0.090 _FVDFCGK(gl)YR_
LRRC58 Ubiquitylation K99 0.080 _TLLAK(gl)NNR_
LRRC58 Ubiquitylation K111 -1.849 -0.940 _LGGPSALPK(gl)GLAQSPLCR_

Background Information for LRRC58:


Pubmed-LRRC58 »
Uniprot-LRRC58 »
Biogrid-LRRC58 »
ProteomicsDB-LRRC58 »

Tumorportal-LRRC58 »
COSMIC-LRRC58 »
GenomeRNAi-LRRC58 »
Genecards-LRRC58


Protein-protein Interactions for LRRC58
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATG14 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CDO1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CUL5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SKP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LRRC58
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Leu-rich_rpt_typical-subtyp IPR003591 0.57
Category members Leu-rich_rpt IPR001611 0.32


Protein complexes (CORUM database) featuring LRRC58
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LRRC58
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF


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