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Query: LRRC47

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LRRC47 0 -1.033 0.980 -0.620 -0.414 -0.523 -0.031 -0.307

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LRRC47 Phosphorylation S431 0.485 _RQS(ph)VSGLHR_
LRRC47 Phosphorylation T510 -0.268 _KYT(ph)LENKEEGSLSDTEADAVSGQLPDPTTNPSAGK_
LRRC47 Phosphorylation S520 -0.243 -0.424 _KYTLENKEEGSLS(ph)DTEADAVSGQLPDPTTNPSAGK_
LRRC47 Phosphorylation Y509 -0.485 _KY(ph)TLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK_
LRRC47 Phosphorylation S518 -0.390 -0.691 _EEGS(ph)LSDTEADAVSGQLPDPTTNPSAGK_

Background Information for LRRC47:


Pubmed-LRRC47 »
Uniprot-LRRC47 »
Biogrid-LRRC47 »
ProteomicsDB-LRRC47 »

Tumorportal-LRRC47 »
COSMIC-LRRC47 »
GenomeRNAi-LRRC47 »
Genecards-LRRC47


Protein-protein Interactions for LRRC47
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in LRRC47
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Leu-rich_rpt_typical-subtyp IPR003591 0.57
Category members Leu-rich_rpt IPR001611 0.32
Category members B3/B4_tRNA-bd IPR005146 0


Protein complexes (CORUM database) featuring LRRC47
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LRRC47
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0004826 phenylalanine-tRNA ligase activity Database 0


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